Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927299.1_cds_XP_016475167.1_67121
CDS Infomation

[gene=LOC107796851] [db_xref=GeneID:107796851] [protein=60S ribosomal export protein NMD3-like] [protein_id=XP_016475167.1] [location=5496..7031] [gbkey=CDS]
Sequence

ATGGCAGAAGTATCAGGAATGTTTACAGTGCAACAAACAATAGGCAGTGTATTATGTTGC
AAATGCGGAATTTTGATGCAACCAAATGCTGCCAATATGTGTGCTAAATGCTTGCGATCT
GAAGTTGATATAACAGAAGGCTTACAAAAACATGTTGTGATTATCCATTGTCCCGAATGC
GATAGCTATTTGCAGCCTCCAAGGAGTTGGATCAAAGCACAGCTCGAATCGAAGGAGTTA
CTCACCTTTTGTATCAAGAGGTTGAAGAATTTAAATAAAGTTAAGTTGATGAATGCTGAG
TTTATTTGGACTGAACCTCATTCCAAAAGGATTAATGTTAGGCTTAGAGTCCAAAAAGAG
GTACTAAACGGAGCTGTTCTTGAACAAACATACACCGTTGAGTATGTTGTTCAAGACCAA
ATGTGTGAATCTTGTTCAAAGGTGCAAGCTAACCCTGATCAATGGGTGGCGGCTGTGCAG
CTTAGACAGCACGTCTCTCATCGAAGAACTTTCTTCTATTTGGAGCAGCTCATTCTTAAG
CACGAGGCTGCAAATCGTGCCATAAAAATTCAACAGTTGGTTCAGGGAATTGATTTCTTC
TTTGCACATAGAAGTCATGCTTTGAAGTTTGTGGACTTTGTGAGTCGGGTGGTACCTGTT
CGGAGCCGAAATGACAAGCAACTTGTATCTCATGATCACAAGAGCAATAACTTCAATTAT
AAGTACACATTCTCCGTAGAAATCTGCCCGATTTGTCGTGAGGATTTGATATGTCTCCCT
CCAAAAGTGGCCGCTAGTTTAGGAAATGTCGGTCCTCTTGTGATCTGCACCAAAGTGAGC
AACAGTATCGCTTTACTAGATCCATTTACTTTGAGGCATTGTTTCTTGGATGCTGATCAG
TACTGGAGGGCGTCGTTTAAGCCTTTGTTGTCTAGTAGACAGCTCGTCGAGTATGTAGTT
TTAGATGTTGATGTGGTTTCTGAAGAAGTTAATATCGGGGGCTCGAAGTATGTTTTAGCT
GATATTCAAGTGGCTCGTGTATCTGATTTCGGGAAAAATGATACTATGTTCTCCGTAAGA
ACACATCTAGGCCATCTTCTAAATCCCGGAGACTATGCCCTCGGTTATGATTTATATAGA
GCAAATAATAATGATATTGAGTTAGACAAATACAAAGGTCTTGTCCTTCCTGAGGTGATA
TTAATTAAGAAAAGCTATGAAGAGAAGCGCCAAAAGAAACGTGGGAAGCATCGATCTTGG
AAGCTTAAGTCGCTTAATATGGAAGTCGATAACTCTGGCAAGGGTAGAGATCAGGAACAA
AAGTTGAACTCAGAATATGAACAATTCTTGAGAGATTTAGAGGAGAATCCTGATCTGAGG
TTCAACATATCATTGTATCGTAATAAGGAATATCAACGATCGGAAGTCACATCTATTGCT
GATGGAGAAGATGTTCCTTCTATTCCTTTGGAGGAGTTACTTGCTGATCTTGATCTTAGT
GATATTGATGTTGAAGAAGATTGCATAAGGGAGTGA

Peptide Sequence

PEP ID

XP_016475167.1
PEP Infomation

PREDICTED: 60S ribosomal export protein NMD3-like [Nicotiana tabacum]
Sequence

MAEVSGMFTVQQTIGSVLCCKCGILMQPNAANMCAKCLRSEVDITEGLQKHVVIIHCPEC
DSYLQPPRSWIKAQLESKELLTFCIKRLKNLNKVKLMNAEFIWTEPHSKRINVRLRVQKE
VLNGAVLEQTYTVEYVVQDQMCESCSKVQANPDQWVAAVQLRQHVSHRRTFFYLEQLILK
HEAANRAIKIQQLVQGIDFFFAHRSHALKFVDFVSRVVPVRSRNDKQLVSHDHKSNNFNY
KYTFSVEICPICREDLICLPPKVAASLGNVGPLVICTKVSNSIALLDPFTLRHCFLDADQ
YWRASFKPLLSSRQLVEYVVLDVDVVSEEVNIGGSKYVLADIQVARVSDFGKNDTMFSVR
THLGHLLNPGDYALGYDLYRANNNDIELDKYKGLVLPEVILIKKSYEEKRQKKRGKHRSW
KLKSLNMEVDNSGKGRDQEQKLNSEYEQFLRDLEENPDLRFNISLYRNKEYQRSEVTSIA
DGEDVPSIPLEELLADLDLSDIDVEEDCIRE

Transcript Sequence

Gene sequence data has not been registered.